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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs35961477 chr3:111266263 GT/G 6.61E-5 487 16.23 14.97 16.55 KM Plot
THCA rs35969935 chr16:20757590 T/C 3.38E-5 490 16.38 14.47 17.65 KM Plot
THCA rs35974780 chr16:20714033 T/C 4.12E-5 486 16.38 14.5 17.65 KM Plot
THCA rs35992336 chr7:64263254 T/C 9.99E-16 489 16.37 14.03 17.32 KM Plot
THCA rs36011496 chr18:21170614 T/TA 4.43E-7 470 15.48 16.97 14 KM Plot
THCA rs36035820 chr8:52438690 G/T 0.000109 475 15.07 18.77 27.1 KM Plot
THCA rs36036214 chr10:81830113 T/TG 0.00027 488 16.2 15.87 11.73 KM Plot
THCA rs36055296 chr16:20713034 G/T 5.9E-13 483 16.13 14.9 13.6 KM Plot
THCA rs36061166 chr7:64265702 G/A 1.11E-15 489 16.37 14.13 17.32 KM Plot
THCA rs36077191 chr11:112039421 C/T 4.17E-5 484 16.17 16.23 12.37 KM Plot
THCA rs36101562 chr4:110755977 G/A 0.000143 473 16.47 16.07 14.55 KM Plot
THCA rs36104827 chr5:113060143 C/T 0 486 15.27 17.77 14.8 KM Plot
THCA rs362266 chr4:3259632 C/G 0.000295 490 17.07 14.92 12.5 KM Plot
THCA rs362267 chr4:3243218 C/T 4.73E-5 479 16.67 14.27 14.3 KM Plot
THCA rs362268 chr4:3242148 C/G 0.000309 486 16.63 14.37 14 KM Plot